STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC6Transmembrane channel-like protein. (775 aa)    
Predicted Functional Partners:
SLC30A1
Solute carrier family 30 member 1.
      
 0.653
STAT3
Signal transducer and activator of transcription.
    
 0.568
EFHB
EF-hand domain family member B.
    
 
 0.534
SYNGR2
MARVEL domain-containing protein.
      
 0.527
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
 0.490
MRVI1
Murine retrovirus integration site 1 homolog.
    
 0.426
ESPNL
Espin like.
   
 0.418
LRRC18
Leucine rich repeat containing 18.
    
 0.408
EME1
Essential meiotic structure-specific endonuclease 1.
   
 0.401
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.