STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APEHAcylaminoacyl-peptide hydrolase. (734 aa)    
Predicted Functional Partners:
BSN
Bassoon presynaptic cytomatrix protein.
 
    
 0.621
PREP
Prolyl endopeptidase.
   
 
 0.611
NCSTN
Nicastrin.
   
  
 0.566
PREPL
Prolyl endopeptidase like.
   
 
 0.474
GHRL
Ghrelin and obestatin prepropeptide.
   
 
 0.465
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.457
FAM234A
Family with sequence similarity 234 member A.
      
 0.457
L3HYPDH
Trans-L-3-hydroxyproline dehydratase.
      
 0.454
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.454
MST1
Macrophage stimulating 1; Belongs to the peptidase S1 family. Plasminogen subfamily.
     
 0.453
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.