STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D2BTBC1 domain family member 2B. (952 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.639
G3TC70_LOXAF
Uncharacterized protein.
    
  0.586
RAB9B
RAB9B, member RAS oncogene family.
    
 0.485
RAB9A
RAB9A, member RAS oncogene family.
    
 0.485
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.475
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.460
RAB7B
RAB7B, member RAS oncogene family.
    
 0.443
CFAP126
Cilia and flagella associated protein 126.
   
   0.429
CCZ1
Uncharacterized protein.
      
 0.424
C1orf194
Chromosome 1 open reading frame 194.
   
   0.420
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.