STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf131Chromosome 9 open reading frame 131. (973 aa)    
Predicted Functional Partners:
G3UIJ0_LOXAF
Ion_trans domain-containing protein.
      
 0.571
PKDREJ
Polycystin family receptor for egg jelly.
    
 
 0.561
C12orf40
Chromosome 12 open reading frame 40.
      
 0.544
G3T0G0_LOXAF
Uncharacterized protein.
      
 0.544
FANCM
FA complementation group M.
   
 0.540
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.531
G3SSC9_LOXAF
Tudor domain-containing protein.
    
 0.515
POLD1
DNA polymerase.
   
 0.514
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.510
PRRX1
Paired related homeobox 1.
    
 
 0.484
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.