STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB48Zinc finger and BTB domain containing 48. (689 aa)    
Predicted Functional Partners:
NOL9
Nucleolar protein 9.
      
 0.593
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.574
DCLRE1B
DNA cross-link repair 1B.
    
 
 0.531
TAS1R1
Taste 1 receptor member 1.
      
 0.530
STK11IP
Serine/threonine kinase 11 interacting protein.
   
    0.513
CPTP
Ceramide-1-phosphate transfer protein.
      
 0.480
PAX7
Paired box 7.
    
 0.461
PAX3
Paired box 3.
    
 0.461
HMBOX1
Homeobox containing 1.
    
 
 0.445
NR2C2
Nuclear receptor subfamily 2 group C member 2.
    
 0.404
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.