STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3U2V4_LOXAFUncharacterized protein. (1492 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.657
CBX2
Chromobox 2.
    
 0.578
G3SVD7_LOXAF
Uncharacterized protein.
    
 0.571
G3THQ5_LOXAF
RING-type domain-containing protein.
    
 0.552
PCGF2
Polycomb group ring finger 2.
    
 0.552
G3T7Z9_LOXAF
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.537
PHC1
Polyhomeotic homolog 1.
 
  
 0.531
RING1
Ring finger protein 1.
    
 0.519
RNF2
RING-type domain-containing protein.
    
 0.519
G3UB93_LOXAF
RAWUL domain-containing protein.
    
 0.519
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.