STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX3SRY-box transcription factor 3. (378 aa)    
Predicted Functional Partners:
POU5F1
POU domain protein.
    
 0.681
G3UHL2_LOXAF
POU-specific domain-containing protein.
    
 0.681
TBX1
T-box transcription factor 1.
      
 0.634
NANOG
Homeobox domain-containing protein.
    
 0.610
TBX20
T-box transcription factor 20.
      
 0.578
CTNNB1
Catenin beta 1.
    
 0.567
LOC100667250
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 
 0.561
RBMX
RNA binding motif protein X-linked.
   
 
 0.545
XKRX
XK-related protein.
      
 0.520
MPDU1
Mannose-P-dolichol utilization defect 1.
      
 0.508
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.