STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHOX2BPaired like homeobox 2B. (311 aa)    
Predicted Functional Partners:
TH
Tyrosine hydroxylase.
   
  
 0.690
HAND2
Heart and neural crest derivatives expressed 2.
   
 
 0.559
DBH
Dopamine beta-hydroxylase.
   
  
 0.552
BARX2
BARX homeobox 2.
   
  
 0.520
HOXC13
Homeobox C13.
   
  
 0.520
NMB
Neuromedin B.
      
 0.512
ATOH1
Atonal bHLH transcription factor 1.
      
 0.512
GATA3
GATA binding protein 3.
      
 0.506
HOXB9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
  
 0.486
GRP
Gastrin releasing peptide.
      
 0.462
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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