Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AATF | BOP1 | ENSLAFP00000028920 | ENSLAFP00000000575 | Apoptosis antagonizing transcription factor. | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.747 |
AATF | BYSL | ENSLAFP00000028920 | ENSLAFP00000029171 | Apoptosis antagonizing transcription factor. | Bystin like. | 0.992 |
AATF | CEBPZ | ENSLAFP00000028920 | ENSLAFP00000000799 | Apoptosis antagonizing transcription factor. | CCAAT enhancer binding protein zeta. | 0.783 |
AATF | DDX18 | ENSLAFP00000028920 | ENSLAFP00000005809 | Apoptosis antagonizing transcription factor. | RNA helicase. | 0.794 |
AATF | DDX56 | ENSLAFP00000028920 | ENSLAFP00000015255 | Apoptosis antagonizing transcription factor. | DEAD-box helicase 56. | 0.901 |
AATF | NOP58 | ENSLAFP00000028920 | ENSLAFP00000023602 | Apoptosis antagonizing transcription factor. | NOP58 ribonucleoprotein. | 0.994 |
AATF | NOP9 | ENSLAFP00000028920 | ENSLAFP00000022653 | Apoptosis antagonizing transcription factor. | NOP9 nucleolar protein. | 0.899 |
AATF | PUM3 | ENSLAFP00000028920 | ENSLAFP00000014544 | Apoptosis antagonizing transcription factor. | Pumilio RNA binding family member 3. | 0.832 |
AATF | RBM19 | ENSLAFP00000028920 | ENSLAFP00000003491 | Apoptosis antagonizing transcription factor. | RNA binding motif protein 19. | 0.933 |
AATF | UTP3 | ENSLAFP00000028920 | ENSLAFP00000023808 | Apoptosis antagonizing transcription factor. | UTP3 small subunit processome component. | 0.992 |
BOP1 | AATF | ENSLAFP00000000575 | ENSLAFP00000028920 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Apoptosis antagonizing transcription factor. | 0.747 |
BOP1 | BYSL | ENSLAFP00000000575 | ENSLAFP00000029171 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Bystin like. | 0.916 |
BOP1 | CEBPZ | ENSLAFP00000000575 | ENSLAFP00000000799 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CCAAT enhancer binding protein zeta. | 0.945 |
BOP1 | DDX18 | ENSLAFP00000000575 | ENSLAFP00000005809 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RNA helicase. | 0.999 |
BOP1 | DDX56 | ENSLAFP00000000575 | ENSLAFP00000015255 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | DEAD-box helicase 56. | 0.959 |
BOP1 | NOP58 | ENSLAFP00000000575 | ENSLAFP00000023602 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | NOP58 ribonucleoprotein. | 0.976 |
BOP1 | NOP9 | ENSLAFP00000000575 | ENSLAFP00000022653 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | NOP9 nucleolar protein. | 0.846 |
BOP1 | PUM3 | ENSLAFP00000000575 | ENSLAFP00000014544 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pumilio RNA binding family member 3. | 0.834 |
BOP1 | RBM19 | ENSLAFP00000000575 | ENSLAFP00000003491 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RNA binding motif protein 19. | 0.901 |
BOP1 | UTP3 | ENSLAFP00000000575 | ENSLAFP00000023808 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | UTP3 small subunit processome component. | 0.778 |
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