STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP9NOP9 nucleolar protein. (635 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
   
   0.940
BYSL
Bystin like.
   
 
 0.933
PUM3
Pumilio RNA binding family member 3.
   
  
 0.911
RBM19
RNA binding motif protein 19.
   
 
 0.902
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.899
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.890
NOP58
NOP58 ribonucleoprotein.
   
   0.887
DDX56
DEAD-box helicase 56.
   
 
 0.883
DDX18
RNA helicase.
   
 
 0.867
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.846
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (18%) [HD]