STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VEZF1Vascular endothelial zinc finger 1. (515 aa)    
Predicted Functional Partners:
NISCH
Nischarin.
      
 0.527
G3TMP7_LOXAF
Stathmin; Belongs to the stathmin family.
    
 0.484
PAGR1
PAXIP1 associated glutamate rich protein 1.
     
 0.456
MAPK1
Mitogen-activated protein kinase.
    
 0.443
MAPK3
Mitogen-activated protein kinase.
    
 0.443
EPOR
Erythropoietin receptor.
      
 0.440
HOXB9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
    
 
 0.439
CDK6
Cyclin dependent kinase 6; Belongs to the protein kinase superfamily.
    
 0.436
GCM1
Glial cells missing transcription factor 1.
    
 
 0.421
KIF22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
 
  
 0.409
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.