STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLAFP00000022963annotation not available (103 aa)    
Predicted Functional Partners:
HAT1
Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG.
    
 0.695
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.670
KDM6A
Lysine demethylase 6A.
   
 0.660
ARID4A
AT-rich interaction domain 4A.
    
 0.654
ARID4B
AT-rich interaction domain 4B.
    
 0.654
H2AZ2
Histone H2A; Belongs to the histone H2A family.
   
 0.629
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 0.629
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.621
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.611
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.611
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.