STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFFADNA fragmentation factor subunit alpha. (332 aa)    
Predicted Functional Partners:
DFFB
DNA fragmentation factor subunit beta.
    
 0.990
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.842
CIDEB
Cell death inducing DFFA like effector b.
    
 
 0.604
CASP6
Caspase 6; Belongs to the peptidase C14A family.
    
 0.570
CASP7
Caspase 7; Belongs to the peptidase C14A family.
    
 0.549
CENPU
Uncharacterized protein.
    
 0.544
G3UFD7_LOXAF
Uncharacterized protein.
    
 0.544
JAGN1
Jagunal homolog 1.
      
 0.520
CASP9
Caspase 9; Belongs to the peptidase C14A family.
    
 0.507
CASP14
Caspase 14; Belongs to the peptidase C14A family.
    
 0.506
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.