STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3U5R6_LOXAFUncharacterized protein. (210 aa)    
Predicted Functional Partners:
ARMC4
Armadillo repeat containing 4.
  
 
 0.704
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.693
ARMC3
Armadillo repeat containing 3.
   
 
 0.665
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.652
TTC25
Tetratricopeptide repeat domain 25.
   
 0.639
EFCAB6
EF-hand calcium binding domain 6.
   
 0.564
C19orf71
Chromosome 19 open reading frame 71.
    
 
 0.550
IQUB
IQ motif and ubiquitin domain containing.
   
 0.549
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 
 0.518
C4orf47
Chromosome 4 open reading frame 47.
    
 
 0.494
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.