STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD7Potassium channel tetramerization domain containing 7. (246 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
 
   
  0.643
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.577
PPT1
Palmitoyl-protein thioesterase 1.
   
  
 0.539
ASB1
Ankyrin repeat and SOCS box containing 1.
     
 0.522
C16orf54
Chromosome 16 open reading frame 54.
      
 0.520
KLHL11
Kelch like family member 11.
     
 0.490
TBL2
Transducin beta like 2.
      
 0.465
UBE2M
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.444
PRICKLE1
Prickle planar cell polarity protein 1.
      
 0.430
KCTD11
Potassium channel tetramerization domain containing 11.
     
0.430
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.