STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX2RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. (416 aa)    
Predicted Functional Partners:
RBM24
RNA binding motif protein 24.
  
 
 0.731
QKI
QKI, KH domain containing RNA binding.
   
 
 0.725
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.661
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.617
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.576
RBM38
RNA binding motif protein 38.
   
 
 0.569
RBM3
RNA binding motif protein 3.
  
 
 
 0.533
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.511
ELAVL4
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.505
ATXN1
Ataxin 1.
    
 
 0.505
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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