STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF7Ras association domain family member 7. (360 aa)    
Predicted Functional Partners:
PDZD4
PDZ domain containing 4.
   
  
 0.701
FERMT2
Fermitin family member 2.
   
  
 0.625
CEP131
Centrosomal protein 131.
      
 0.597
CDKL1
Cyclin dependent kinase like 1; Belongs to the protein kinase superfamily.
      
 0.569
CDKL2
Cyclin dependent kinase like 2.
      
 0.569
PPP1R13B
Protein phosphatase 1 regulatory subunit 13B.
    
 
 0.543
RASSF10
Ras association domain family member 10.
    
 
 0.532
CDKL5
Cyclin dependent kinase like 5.
      
 0.515
MAP1S
Microtubule associated protein 1S.
      
 0.506
IL10RB
Interleukin 10 receptor subunit beta.
    
 
 0.506
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.