STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC39Coiled-coil domain containing 39. (940 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
    
 
 0.832
CCDC65
Coiled-coil domain containing 65.
   
 
 0.766
ARMC4
Armadillo repeat containing 4.
   
 
 0.717
LRRC6
Leucine rich repeat containing 6.
   
 0.709
RSPH9
Radial spoke head 9 homolog.
    
 
 0.704
DNAI2
Dynein axonemal intermediate chain 2.
   
 
 0.696
ZMYND10
Zinc finger MYND domain-containing protein 10; Plays a role in axonemal structure organization and motility. Involved in axonemal pre-assembly of inner and outer dynein arms (IDA and ODA, respectively) for proper axoneme building for cilia motility. May act by indirectly regulating transcription of dynein proteins. Belongs to the ZMYND10 family.
    
 
 0.672
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.648
DNAAF1
Dynein assembly factor 1, axonemal.
    
 
 0.641
DNALI1
Dynein axonemal light intermediate chain 1.
    
 
 0.639
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.