STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB1Calcium and integrin binding 1. (176 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.838
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 
 0.766
NIN
Uncharacterized protein.
    
 
 0.742
TRIP13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
    
 
 0.725
CRY2
Cryptochrome circadian regulator 2.
    
 
 0.723
CHD6
Chromodomain helicase DNA binding protein 6.
   
 0.714
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
   
 0.714
SPICE1
Uncharacterized protein.
      
 0.707
ARHGEF1
Rho guanine nucleotide exchange factor 1.
      
 0.690
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 
 0.685
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.