Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BOP1 | DDX18 | ENSLAFP00000000575 | ENSLAFP00000005809 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RNA helicase. | 0.999 |
BOP1 | EBNA1BP2 | ENSLAFP00000000575 | ENSLAFP00000015658 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | EBNA1 binding protein 2. | 0.996 |
BOP1 | FTSJ3 | ENSLAFP00000000575 | ENSLAFP00000002704 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.992 |
BOP1 | GTPBP4 | ENSLAFP00000000575 | ENSLAFP00000015575 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.994 |
BOP1 | MAK16 | ENSLAFP00000000575 | ENSLAFP00000018764 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.952 |
BOP1 | PES1 | ENSLAFP00000000575 | ENSLAFP00000017739 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo ribosomal biogenesis factor 1. | 0.999 |
BOP1 | RPF1 | ENSLAFP00000000575 | ENSLAFP00000005906 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome production factor 1 homolog. | 0.969 |
BOP1 | RSL24D1 | ENSLAFP00000000575 | ENSLAFP00000003907 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosomal L24 domain containing 1. | 0.988 |
BOP1 | WDR12 | ENSLAFP00000000575 | ENSLAFP00000009990 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
BOP1 | WDR74 | ENSLAFP00000000575 | ENSLAFP00000023714 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | WD repeat domain 74. | 0.998 |
DDX18 | BOP1 | ENSLAFP00000005809 | ENSLAFP00000000575 | RNA helicase. | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
DDX18 | EBNA1BP2 | ENSLAFP00000005809 | ENSLAFP00000015658 | RNA helicase. | EBNA1 binding protein 2. | 0.985 |
DDX18 | FTSJ3 | ENSLAFP00000005809 | ENSLAFP00000002704 | RNA helicase. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.992 |
DDX18 | GTPBP4 | ENSLAFP00000005809 | ENSLAFP00000015575 | RNA helicase. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.993 |
DDX18 | MAK16 | ENSLAFP00000005809 | ENSLAFP00000018764 | RNA helicase. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.975 |
DDX18 | PES1 | ENSLAFP00000005809 | ENSLAFP00000017739 | RNA helicase. | Pescadillo ribosomal biogenesis factor 1. | 0.995 |
DDX18 | RPF1 | ENSLAFP00000005809 | ENSLAFP00000005906 | RNA helicase. | Ribosome production factor 1 homolog. | 0.982 |
DDX18 | RSL24D1 | ENSLAFP00000005809 | ENSLAFP00000003907 | RNA helicase. | Ribosomal L24 domain containing 1. | 0.972 |
DDX18 | WDR12 | ENSLAFP00000005809 | ENSLAFP00000009990 | RNA helicase. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
DDX18 | WDR74 | ENSLAFP00000005809 | ENSLAFP00000023714 | RNA helicase. | WD repeat domain 74. | 0.989 |
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