STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (410 aa)    
Predicted Functional Partners:
HNRNPA1
Uncharacterized protein.
  
0.951
G3T3J4_LOXAF
RRM domain-containing protein.
   
 0.924
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.907
G3U4N4_LOXAF
RRM domain-containing protein.
   
 0.896
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.881
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.868
SRSF1
Uncharacterized protein.
   
 0.841
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.837
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.833
SF3B1
Splicing factor 3b subunit 1.
   
 0.816
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.