STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D13TBC1 domain family member 13. (400 aa)    
Predicted Functional Partners:
RAB35
RAB35, member RAS oncogene family.
     
 0.763
TBC1D21
TBC1 domain family member 21.
   
  
 0.625
TBC1D10C
TBC1 domain family member 10C.
      
 0.610
IFT27
Intraflagellar transport 27.
     
 0.609
SPOUT1
SPOUT domain containing methyltransferase 1.
      
 0.577
TBC1D19
TBC1 domain family member 19.
      
 0.556
EVI5
Ecotropic viral integration site 5.
     
 0.542
TBC1D8
TBC1 domain family member 8.
     
 0.540
TBC1D24
Uncharacterized protein.
      
 0.536
PEX6
Peroxisomal biogenesis factor 6.
   
  
 0.533
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.