STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3U976_LOXAFANK_REP_REGION domain-containing protein. (259 aa)    
Predicted Functional Partners:
MPHOSPH8
Chromo domain-containing protein.
 
  
 
 0.915
DNMT3A
DNA methyltransferase 3 alpha; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.779
DNMT3B
DNA methyltransferase 3 beta; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.628
LOC100655240
Histone domain-containing protein.
   
 0.623
ALKBH3
AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
   
 0.623
LOC100672618
Histone H3; Belongs to the histone H3 family.
   
 0.623
G5E6Z7_LOXAF
Histone domain-containing protein.
   
 0.623
ENSLAFP00000016544
annotation not available
   
 0.623
LOC111752373
Histone H3; Belongs to the histone H3 family.
   
 0.623
ENSLAFP00000018749
annotation not available
   
 0.623
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.