STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCORL1BCL6 corepressor like 1. (1788 aa)    
Predicted Functional Partners:
PCGF1
Polycomb group ring finger 1.
    
 0.761
BCL6B
BCL6B transcription repressor.
    
 0.732
BCL6
BCL6 transcription repressor.
    
 0.732
KDM2B
Lysine demethylase 2B.
   
 0.726
PCGF6
Polycomb group ring finger 6.
    
 0.689
MLLT3
MLLT3 super elongation complex subunit.
    
 
 0.661
MLLT1
MLLT1 super elongation complex subunit.
    
 
 0.661
KDM2A
Lysine demethylase 2A.
   
 0.607
RING1
Ring finger protein 1.
    
 0.603
RYBP
RING1 and YY1 binding protein.
    
 
 0.532
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.