STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3U9P8_LOXAFF-box domain-containing protein. (180 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.645
G3U9C6_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.645
G3ULX5_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.645
TEKT3
Tektin 3.
   
  
 0.625
TRIP12
Thyroid hormone receptor interactor 12.
   
  
 0.563
DNAH10
Dynein axonemal heavy chain 10.
   
  
 0.562
ANKEF1
Ankyrin repeat and EF-hand domain containing 1.
   
 
  0.554
CFAP65
Cilia and flagella associated protein 65.
   
 
  0.554
TSNAXIP1
Translin associated factor X interacting protein 1.
   
  
 0.553
DRC3
Dynein regulatory complex subunit 3.
   
 
  0.549
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.