STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BORCS6BLOC-1 related complex subunit 6. (338 aa)    
Predicted Functional Partners:
BORCS8
Uncharacterized protein.
   
 0.863
BORCS5
BLOC-1 related complex subunit 5.
    
 0.857
BLOC1S1
Uncharacterized protein.
    
 0.854
SNAPIN
SNARE-associated protein Snapin; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. Plays a role in intracellular vesicle trafficking and synaptic vesicle recycling; Belongs to t [...]
   
 0.840
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 0.834
BORCS7
Uncharacterized protein.
    
 
 0.577
G3UA88_LOXAF
Uncharacterized protein.
    
 
 0.577
CREBL2
cAMP responsive element binding protein like 2.
    
 
 0.516
MPDU1
Mannose-P-dolichol utilization defect 1.
      
 0.440
NDEL1
NudE neurodevelopment protein 1 like 1.
    
 
 0.416
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.