STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFKBIENFKB inhibitor epsilon. (360 aa)    
Predicted Functional Partners:
REL
REL proto-oncogene, NF-kB subunit.
   
 0.942
RELB
RELB proto-oncogene, NF-kB subunit.
   
 0.920
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.913
NFKB1
Nuclear factor kappa B subunit 1.
   
0.779
NFKBIB
NFKB inhibitor beta.
   
0.759
SLC35B2
Solute carrier family 35 member B2.
 
  
 
 0.697
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.686
PPP6C
Serine/threonine-protein phosphatase.
    
 0.680
NFKB2
Nuclear factor kappa B subunit 2.
   
0.669
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.635
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.