STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB2Homeobox B2. (355 aa)    
Predicted Functional Partners:
HOXB5
Homeobox B5.
   
 
0.657
SPDEF
SAM pointed domain containing ETS transcription factor.
      
 0.543
SNAI2
Snail family transcriptional repressor 2.
   
 
 0.531
TSPAN11
Tetraspanin.
      
 0.505
HOXB8
Homeobox B8.
   
 
0.478
HOXB3
Homeobox B3.
   
  
0.477
HOXB7
Homeobox B7.
   
 
0.463
FOSL2
FOS like 2, AP-1 transcription factor subunit.
   
 
 0.454
PKNOX2
PBX/knotted 1 homeobox 2.
   
 0.448
GJB1
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.444
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.