STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP39Rho GTPase activating protein 39. (1120 aa)    
Predicted Functional Partners:
RHOF
Ras homolog family member F, filopodia associated.
    
 0.505
ARHGAP1
Rho GTPase activating protein 1.
     
0.500
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.497
CDC42
Uncharacterized protein.
    
 0.484
RPL18
Ribosomal protein L18.
    
 0.484
RHOG
Ras homolog family member G.
    
 0.466
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 0.456
RPL3L
Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.
    
 0.456
NCF4
Neutrophil cytosolic factor 4.
   
 
 0.449
SIPA1L1
Signal induced proliferation associated 1 like 1.
      
 0.445
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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