STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIB2Calcium and integrin binding family member 2. (190 aa)    
Predicted Functional Partners:
TMC1
Transmembrane channel-like protein.
    
 0.912
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 
 0.776
TMIE
Transmembrane inner ear.
     
 0.721
TMC2
Transmembrane channel-like protein.
    
 0.655
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.645
MYH14
Myosin heavy chain 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.638
LHFPL4
LHFPL tetraspan subfamily member 4.
   
 
 0.612
USH1G
USH1 protein network component sans.
    
 0.603
WHRN
Whirlin.
    
 
 0.591
USH1C
USH1 protein network component harmonin.
    
 
 0.539
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.