STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACKR1Atypical chemokine receptor 1 (Duffy blood group). (331 aa)    
Predicted Functional Partners:
CCL2
C-C motif chemokine.
   
 
 0.742
CXCL1
C-X-C motif chemokine.
    
 
 0.728
TNFRSF14
Uncharacterized protein.
      
 0.723
NECTIN1
Nectin cell adhesion molecule 1.
      
 0.723
CXCL8
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
     
 0.663
CCL14
SCY domain-containing protein.
   
 
 0.636
G3TJZ3_LOXAF
SCY domain-containing protein.
    
 
 0.560
ACKR4
Atypical chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family.
      
 0.539
CCL5
SCY domain-containing protein.
   
 
 0.526
TNFSF14
Tumor necrosis factor ligand 1D; Belongs to the tumor necrosis factor family.
      
 0.522
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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