STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UBE5_LOXAFUncharacterized protein. (152 aa)    
Predicted Functional Partners:
TH
Tyrosine hydroxylase.
 
 
 
 0.925
TPH1
BH4_AAA_HYDROXYL_2 domain-containing protein.
 
     0.923
PCBD1
Pterin-4 alpha-carbinolamine dehydratase 1.
  
 0.766
PCBD2
Pterin-4 alpha-carbinolamine dehydratase 2.
  
 0.766
HGD
Homogentisate 1,2-dioxygenase.
  
  
 0.681
YWHAZ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta; Belongs to the 14-3-3 family.
    
 
 0.521
SERGEF
Secretion regulating guanine nucleotide exchange factor.
 
    
 0.479
SLC6A4
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.445
HPDL
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.436
HPD
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.436
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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