STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHANK3ANK_REP_REGION domain-containing protein. (342 aa)    
Predicted Functional Partners:
DLGAP3
DLG associated protein 3.
   
 0.952
DLGAP2
DLG associated protein 2.
   
 0.942
DLGAP1
DLG associated protein 1.
   
 0.910
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
   
 0.857
NLGN3
Neuroligin 3.
   
 0.853
DLGAP4
DLG associated protein 4.
    
 0.788
HOMER1
Homer scaffold protein 1.
    
 0.764
SHANK2
SH3 and multiple ankyrin repeat domains 2.
 
  
 0.748
DLGAP5
DLG associated protein 5.
    
 0.702
NLGN2
Neuroligin 2.
   
 0.675
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.