STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDPGP1Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
MRPS6
Mitochondrial ribosomal protein S6.
    
 
 0.541
LOC100658302
FAD-binding PCMH-type domain-containing protein.
      
 0.450
GGNBP2
Gametogenetin binding protein 2.
      
 0.450
FBXO43
F-box protein 43.
      
 0.449
AS3MT
Arsenite methyltransferase.
      
 0.449
UXS1
UDP-glucuronate decarboxylase 1.
     
 0.449
MPI
Mannose-6-phosphate isomerase.
      
 0.446
MIOX
Myo-inositol oxygenase.
      
 0.430
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.