STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN9Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family. (185 aa)    
Predicted Functional Partners:
G3U5F5_LOXAF
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.784
CST11
Cystatin 11.
   
  
 0.658
LCN6
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.654
LCN1
Lipocalin 1; Belongs to the calycin superfamily. Lipocalin family.
   
 
0.577
TTLL11
Tubulin tyrosine ligase like 11.
      
 0.550
RNASE10
Ribonuclease A family member 10 (inactive); Belongs to the pancreatic ribonuclease family.
   
  
 0.529
FABP9
Fatty acid binding protein 9; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.493
APOD
Apolipoprotein D.
     
 0.486
G3TUE8_LOXAF
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
0.471
G3UD48_LOXAF
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.468
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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