STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UC19_LOXAFUncharacterized protein. (392 aa)    
Predicted Functional Partners:
G3UM40_LOXAF
Uncharacterized protein.
 
     0.947
G3TD57_LOXAF
Uncharacterized protein.
 
     0.945
DDX60L
Uncharacterized protein.
 
     0.940
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.800
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
 0.800
TTC37
Tetratricopeptide repeat domain 37.
   
 0.751
EXOSC10
Exosome component 10.
   
 0.749
EXOSC2
Exosome component 2.
   
 0.717
EXOSC9
Exosome component 9.
   
 0.717
EXOSC7
Exosome component 7.
   
 0.716
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.