STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCL28C-C motif chemokine. (106 aa)    
Predicted Functional Partners:
CCR10
C-C motif chemokine receptor 10; Belongs to the G-protein coupled receptor 1 family.
    
 0.979
CXCL13
C-X-C motif chemokine ligand 13.
    
 0.948
CXCL12
C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.940
CXCL10
C-X-C motif chemokine.
    
 0.939
CXCL9
C-X-C motif chemokine.
    
 0.938
CCR3
C-C motif chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.
     
 0.935
PPBP
C-X-C motif chemokine.
    
 0.932
CCL21
SCY domain-containing protein.
    
 0.930
CCL27
C-C motif chemokine ligand 27.
  
  
 
0.927
CCL24
C-C motif chemokine ligand 24.
    
 0.925
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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