STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN5Contactin 5. (773 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
   
 
 0.732
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.725
APLP1
Amyloid beta precursor like protein 1.
   
 
 0.658
CHL1
Cell adhesion molecule L1 like.
   
0.640
NRCAM
Neuronal cell adhesion molecule.
   
0.640
L1CAM
L1 cell adhesion molecule.
   
0.608
NFASC
Neurofascin.
    
0.570
KIRREL3
Kirre like nephrin family adhesion molecule 3.
   
 0.569
CD177
UPAR/Ly6 domain-containing protein.
      
 0.541
KCNG4
Potassium voltage-gated channel modifier subfamily G member 4; Belongs to the potassium channel family.
   
 0.528
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.