STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTX2Orthodenticle homeobox 2. (297 aa)    
Predicted Functional Partners:
ZNF366
Zinc finger protein 366.
    
 
 0.855
HHEX
Hematopoietically expressed homeobox.
   
  
 0.801
GLIS1
GLIS family zinc finger 1.
    
 
 0.731
CPLX4
Complexin 4.
   
  
 0.617
RORB
RAR related orphan receptor B.
    
 
 0.600
FOXG1
Uncharacterized protein.
   
  
 0.588
FGF5
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.583
POU5F1
POU domain protein.
   
 
 0.574
FOXA1
Forkhead box A1.
   
 
 0.546
FOXA2
Forkhead box A2.
   
 
 0.531
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.