STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF6PHD finger protein 6. (450 aa)    
Predicted Functional Partners:
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.690
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.690
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.636
KDM5C
Lysine demethylase 5C.
   
 0.629
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.628
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.597
EED
Embryonic ectoderm development.
   
 0.579
KDM6A
Lysine demethylase 6A.
   
 0.553
PHF8
PHD finger protein 8.
   
 0.519
CREBBP
CREB binding protein.
   
 0.517
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.