STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UDQ6_LOXAFVWFD domain-containing protein. (385 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.659
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
 0.659
GP1BA
Glycoprotein Ib platelet subunit alpha.
    
 0.625
GLE1
GLE1 RNA export mediator.
   
 0.566
NUP214
Nucleoporin 214.
   
 0.513
RANBP2
RAN binding protein 2.
   
 
 0.501
AAAS
Aladin WD repeat nucleoporin.
    
 0.500
F5
Coagulation factor V; Belongs to the multicopper oxidase family.
    
 0.486
F8
Coagulation factor VIII; Belongs to the multicopper oxidase family.
    
 0.486
NUP50
Nucleoporin 50.
     
 0.486
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.