STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UE53_LOXAFRING-type domain-containing protein. (745 aa)    
Predicted Functional Partners:
PARP9
Poly(ADP-ribose) polymerase family member 9.
   
 0.921
NOTCH2
Notch receptor 2.
    
 0.916
NOTCH1
Uncharacterized protein.
    
 0.914
PARP14
Poly [ADP-ribose] polymerase.
 
 
 0.759
FAM162A
Family with sequence similarity 162 member A.
   
 0.674
DDX58
DExD/H-box helicase 58.
   
 0.559
FAM162B
Family with sequence similarity 162 member B.
   
 0.469
IFIH1
Interferon induced with helicase C domain 1.
   
 0.466
STAT1
Signal transducer and activator of transcription.
   
 0.437
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.