STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTTDNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (531 aa)    
Predicted Functional Partners:
XRCC1
X-ray repair cross complementing 1.
   
 0.768
LIG1
DNA ligase.
  
 0.669
LIG4
DNA ligase.
  
 0.658
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
    
 
 0.611
EXO1
Exonuclease 1.
   
 0.596
ARPP21
cAMP regulated phosphoprotein 21.
   
  
 0.595
GTF2A1
General transcription factor IIA subunit 1.
   
  
 0.583
LIG3
DNA ligase.
  
 0.573
XRCC5
X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.
     
 0.568
PNKP
Polynucleotide kinase 3'-phosphatase.
    
 0.549
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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