STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMF1Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
DSN1
DSN1 component of MIS12 kinetochore complex.
    
 0.985
NSL1
NSL1 component of MIS12 kinetochore complex.
    
 0.971
MIS12
MIS12 kinetochore complex component.
    
 0.957
SPC24
Uncharacterized protein.
   
 0.892
NUF2
NUF2 component of NDC80 kinetochore complex.
    
 0.837
NDC80
NDC80 kinetochore complex component.
    
 0.722
ZWINT
ZW10 interacting kinetochore protein.
    
 
 0.690
SLC25A44
Solute carrier family 25 member 44; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
    
 0.687
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.671
SPC25
SPC25 component of NDC80 kinetochore complex.
    
  0.667
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.