STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMBLDLH domain-containing protein. (108 aa)    
Predicted Functional Partners:
G3SZF5_LOXAF
Fe-ADH domain-containing protein.
  
 
 0.910
HADH
Hydroxyacyl-CoA dehydrogenase.
   
 
 0.783
CRYL1
Crystallin lambda 1.
   
 
 0.776
JOSD1
Josephin domain containing 1.
      
 0.706
PDK4
Protein-serine/threonine kinase.
   
  
 0.649
IRF9
Interferon regulatory factor 9.
      
 0.537
MARCHF6
Membrane associated ring-CH-type finger 6.
      
 0.523
ATPSCKMT
ATP synthase c subunit lysine N-methyltransferase.
      
 0.522
ROPN1
Uncharacterized protein.
      
 0.519
G3UHU0_LOXAF
Josephin domain-containing protein.
      
 0.499
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.