STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABHD11Abhydrolase domain containing 11. (305 aa)    
Predicted Functional Partners:
ABHD6
Abhydrolase domain containing 6.
      
 0.717
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
 
      0.662
ROGDI
Rogdi atypical leucine zipper.
      
 0.583
MYLIP
Myosin regulatory light chain interacting protein.
    
 
 0.526
PAFAH2
Platelet-activating factor acetylhydrolase.
   
  
 0.524
ABHD18
Abhydrolase domain containing 18.
      
 0.520
IAH1
Isoamyl acetate hydrolyzing esterase 1 (putative).
      
 0.515
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.512
PALB2
Partner and localizer of BRCA2.
  
 0.512
ACOX2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.511
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.