STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL4Tubulin tyrosine ligase like 4. (1201 aa)    
Predicted Functional Partners:
AGBL4
Peptidase_M14 domain-containing protein.
   
 
 0.676
TTLL12
Tubulin tyrosine ligase like 12.
      
0.588
TTLL5
Tubulin tyrosine ligase like 5.
   
  
0.586
TTL
Tubulin tyrosine ligase.
   
  
0.537
AGTPBP1
ATP/GTP binding protein 1.
   
 
 0.505
AGBL1
Uncharacterized protein.
   
 
 0.456
ATAT1
Alpha-tubulin N-acetyltransferase 1; Specifically acetylates 'Lys-40' in alpha-tubulin on the lumenal side of microtubules. Promotes microtubule destabilization and accelerates microtubule dynamics; this activity may be independent of acetylation activity. Acetylates alpha-tubulin with a slow enzymatic rate, due to a catalytic site that is not optimized for acetyl transfer. Enters the microtubule through each end and diffuses quickly throughout the lumen of microtubules. Acetylates only long/old microtubules because of its slow acetylation rate since it does not have time to act on dyn [...]
      
 0.452
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
      
 0.447
AGBL2
ATP/GTP binding protein like 2.
   
 
 0.440
CAVIN2
Caveolae associated protein 2.
  
     0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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