STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H7BZinc finger CCCH-type containing 7B. (997 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.777
TSC1
TSC complex subunit 1.
   
 0.677
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
   
 0.677
TRAP1
TNF receptor associated protein 1.
   
 0.677
HSP90AA1
HATPase_c domain-containing protein.
   
 0.677
G3ULS6_LOXAF
Uncharacterized protein.
   
 0.677
LOC100674165
Uncharacterized protein.
   
 0.639
PTGES3
CS domain-containing protein.
   
 0.639
WDHD1
WD repeat and HMG-box DNA binding protein 1.
    
 
 0.596
AHSA1
Activator of HSP90 ATPase activity 1.
   
 
 0.589
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.