STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3UF32_LOXAFUncharacterized protein. (126 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
 0.999
RPS28
Ribosomal protein S28.
  
 0.946
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
  
 0.944
G3U6S6_LOXAF
Uncharacterized protein.
  
 0.944
RPS19
Ribosomal protein S19.
   
 0.943
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.943
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.943
RPS20
Ribosomal_S10 domain-containing protein.
   
 0.942
RPS10
Ribosomal protein S10.
   
 0.942
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.