STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGBUncharacterized protein. (259 aa)    
Predicted Functional Partners:
CHGA
Chromogranin A.
   
 
 0.924
SCG3
Secretogranin III.
   
  
 0.618
SCG5
Secretogranin V.
   
  
 0.582
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
  0.514
TMEM156
Transmembrane protein 156.
  
     0.470
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.443
CCP110
Centriolar coiled-coil protein 110.
  
 
 
 0.443
NPY
Neuropeptide Y.
      
 0.443
WDR18
WD repeat domain 18.
   
 0.433
IL12B
Interleukin-12 subunit beta; Cytokine that can act as a growth factor for activated T and NK cells, enhance the lytic activity of NK/lymphokine-activated killer cells, and stimulate the production of IFN-gamma by resting PBMC.
  
     0.425
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.