STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR5Cadherin related family member 5. (841 aa)    
Predicted Functional Partners:
CDHR2
Cadherin related family member 2.
   
 0.919
CDH23
Cadherin related 23.
   
0.807
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 0.660
LHFPL4
LHFPL tetraspan subfamily member 4.
   
 0.660
USH1C
USH1 protein network component harmonin.
   
 
 0.646
MAPRE3
Microtubule associated protein RP/EB family member 3.
    
 
 0.592
ARHGEF4
Rho guanine nucleotide exchange factor 4.
   
  
 0.589
CTNNB1
Catenin beta 1.
    
 0.575
OLFML1
Olfactomedin like 1.
      
 0.550
NSMF
NMDA receptor synaptonuclear signaling and neuronal migration factor.
      
 0.543
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.